2001 F350 Superduty v10. Had a clifford Remote Starter/Keyless Entry system put on 9 months ago. this sytem now works every once in a while. About 2-3 months ago I went to wire up some heated mirrors (even thought my truck does not accomidate Heated mirrors), I had pulled the ENTIRE fuse box. After I realized that adding a fuse to the fuse box is not gonna happen i put everything back the way it was. Shortly there after I had some issues with my remote starter unit. As of last Friday (06-24-11), all of my lights worked on my truck. Put my father in law's truck camper in the bed and went camping. All the lights (inside and out) work perfect on the way up there. On the way back, the running/parking lights would not come on as well as the instument clusted lights. Headlights work, brake lights work, blinkers work...just not the running/parking lights. Any ideas? I heard a rumor that after pulling the fuse box you may need to flash the GEM Module, but I have not had any issues with the truck until this last weekend. Although the keyless entry part has been acting up for a few weeks now.

Thanks in advance for any insight you might be able to throw my way.