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If you don’t have access to a smoke machine, you can use something as thin as a coke
can, cut a piece, and make a temp “block off plate between the EGR and the intake. If it doesn’t do it again, found that problem! As for the tps, did you have the battery disconnected while redoing the computer?
That replacement cap area looks suspect. I would ohm it to make sure it’s good. Inspect the entire board!
An ohm meter won't test anything...you need a capacitance tester to show the caps microfared's. The ESR is a factor when choosing a high dollar cap but not in a burned up cap.
I just bought one on Amazon for $18.... I repair guitar amps on occasion.