Steve, I don't check in here often, sorry for not getting back to you sooner. I used the wiring diagram found here:
Duraspark II Conversion Basics
This schematic does show a capacitor being used. In either case, the capacitor was used to try to prevent any unwanted spark/ignition noise from interfering with a vehicle's radio. It will certainly not hurt anything by leaving it on there, in my opinion.
Probably the single most important thing is to be sure that the coil is getting the proper voltage. Ford ( cars and light trucks) used a resistor wire to drop the voltage down a bit so the coil didn't overheat and cook itself. I replaced my wire to feed my coil the full 13.8 +/- volts. I have not had any failures or issues since installation, years ago.
Good Luck,
Jason Kendrick