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My guess would be different years maybe, or perhaps casting places. I think i saw that all cylinder heads on the 400 were the same from 75 on? Check out bubbaf250's website. Good info there.
The A2A & A3A are engineering revison #s. I don't know of any place to find out exactly what was changed but I'd suspect they're virtually identical. I wouldn't hesitate to use them on the same motor.